If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 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'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ), 'gf_id' => 'HOM05D000520', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000520' ), 'data_identifier' => 'HOM05D000520', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000520', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1042', 'num_species' => '93' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p05190' => 'bna', 'A02p38710' => 'bna', 'A03p34030' => 'bna', 'A03p34530' => 'bna', 'A04p11080' => 'bna', 'A05p41870' => 'bna', 'A05p42360' => 'bna', 'A09p19190' => 'bna', 'A09p41720' => 'bna', 'A10p20600' => 'bna', 'A10p30840' => 'bna', 'Aa31LG11G10640' => 'aar', 'Aa31LG11G6450' => 'aar', 'Aa31LG11G9430' => 'aar', 'Aa31LG2G11670' => 'aar', 'Aa31LG5G15600' => 'aar', 'Aa31LG5G16650' => 'aar', 'Aa31LG7G7010' => 'aar', 'Actinidia00088' => 'ach', 'Actinidia00652' => 'ach', 'Actinidia02953' => 'ach', 'Actinidia08516' => 'ach', 'Actinidia14956' => 'ach', 'Actinidia15253' => 'ach', 'Actinidia19540' => 'ach', 'Actinidia19782' => 'ach', 'Actinidia19801' => 'ach', 'Actinidia21058' => 'ach', 'Actinidia21490' => 'ach', 'Actinidia23478' => 'ach', 'Actinidia23612' => 'ach', 'Actinidia24329' => 'ach', 'Actinidia24838' => 'ach', 'Actinidia24975' => 'ach', 'Actinidia30414' => 'ach', 'Actinidia31979' => 'ach', 'Actinidia35396' => 'ach', 'Actinidia36680' => 'ach', 'Actinidia40190' => 'ach', 'Actinidia40258' => 'ach', 'Ah.04g153860' => 'amhyb', 'Ah.04g159770' => 'amhyb', 'Ah.04g161080' => 'amhyb', 'Ah.06g189150' => 'amhyb', 'Ah.08g213230' => 'amhyb', 'Ah.13g074900' => 'amhyb', 'Ah.15g093330' => 'amhyb', 'Ah.16g101360' => 'amhyb', 'AL1G36570' => 'aly', 'AL1G65730' => 'aly', 'AL3G15650' => 'aly', 'AL3G16980' => 'aly', 'AL6G15260' => 'aly', 'AL6G30480' => 'aly', 'AL6G39340' => 'aly', 'AL7G46760' => 'aly', 'Aqoxy2G03000' => 'aox', 'Aqoxy2G03274' => 'aox', 'Aqoxy3G00937' => 'aox', 'Aqoxy4G02185' => 'aox', 'Aqoxy5G00529' => 'aox', 'Aqoxy5G00713' => 'aox', 'Aqoxy5G02957' => 'aox', 'arahy.Tifrunner.gnm1.ann1.08TEND' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0J4HUG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.110NX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1699GZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.46LX0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4A91W2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6766IL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8E5SLS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ABWE2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AKZT21' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BFI5I2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BTHT4S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CT4NDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H24US0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J3K1ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K1C9AI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KQD4NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MC15QU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N16IJ2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RGBH4Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RN6BG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S51AWQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ6GL8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V52TQU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WNP8KX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XV7MNQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y3J10V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z22JU0' => 'arhy', 'AT1G23000' => 'ath', 'AT1G56210' => 'ath', 'AT3G05220' => 'ath', 'AT3G06130' => 'ath', 'AT5G05365' => 'ath', 'AT5G19090' => 'ath', 'AT5G27690' => 'ath', 'AT5G37860' => 'ath', 'ATR0582G014' => 'atr', 'ATR0626G212' => 'atr', 'ATR0686G033' => 'atr', 'ATR0796G208' => 'atr', 'Atru.chr12.134' => 'acertr', 'Atru.chr13.1890' => 'acertr', 'Atru.chr2.24' => 'acertr', 'Atru.chr2.464' => 'acertr', 'Atru.chr4.2566' => 'acertr', 'Atru.chr5.1202' => 'acertr', 'Atru.chr5.1357' => 'acertr', 'Atru.chr6.2740' => 'acertr', 'AUR62000774' => 'cqu', 'AUR62000891' => 'cqu', 'AUR62005083' => 'cqu', 'AUR62005195' => 'cqu', 'AUR62008611' => 'cqu', 'AUR62022965' => 'cqu', 'AUR62023201' => 'cqu', 'AUR62030091' => 'cqu', 'AUR62038213' => 'cqu', 'AUR62038214' => 'cqu', 'BcaB04g19213' => 'bca', 'BcaB04g19277' => 'bca', 'BcaB04g21451' => 'bca', 'BcaB05g23361' => 'bca', 'BcaB06g27152' => 'bca', 'BcaB07g31116' => 'bca', 'BcaB07g32297' => 'bca', 'BcaB07g32298' => 'bca', 'BcaB07g34197' => 'bca', 'BcaB08g36614' => 'bca', 'BcaC01g04326' => 'bca', 'BcaC02g09620' => 'bca', 'BcaC03g13633' => 'bca', 'BcaC03g17796' => 'bca', 'BcaC04g18611' => 'bca', 'BcaC04g22039' => 'bca', 'BcaC05g26212' => 'bca', 'BcaC05g30010' => 'bca', 'BcaC05g30053' => 'bca', 'BcaC05g30146' => 'bca', 'BcaC06g32249' => 'bca', 'BNapus_Darmor_BZH_scaffold_114p00230' => 'bna', 'BolC1t05705H' => 'bol', 'BolC2t06934H' => 'bol', 'BolC2t11889H' => 'bol', 'BolC3t16481H' => 'bol', 'BolC4t26054H' => 'bol', 'BolC5t30922H' => 'bol', 'BolC5t34771H' => 'bol', 'BolC5t34857H' => 'bol', 'BolC9t55337H' => 'bol', 'BolC9t58600H' => 'bol', 'BolC9t59896H' => 'bol', 'BraA02t05479Z' => 'bra', 'BraA02t08848Z' => 'bra', 'BraA03t12577Z' => 'bra', 'BraA03t12630Z' => 'bra', 'BraA04t16770Z' => 'bra', 'BraA05t22906Z' => 'bra', 'BraA05t23015Z' => 'bra', 'BraA09t37537Z' => 'bra', 'BraA09t39661Z' => 'bra', 'BraA10t44122Z' => 'bra', 'BraA10t45126Z' => 'bra', 'BraA10t45127Z' => 'bra', 'BraSC132t45515Z' => 'bra', 'C02p10270' => 'bna', 'C02p58230' => 'bna', 'C03p41430' => 'bna', 'C03p42000' => 'bna', 'C04p44800' => 'bna', 'C05p22210' => 'bna', 'C05p61130' => 'bna', 'C05p61970' => 'bna', 'C09p24200' => 'bna', 'C09p57300' => 'bna', 'C09p71340' => 'bna', 'CAN.G1132.7' => 'can', 'CAN.G126.78' => 'can', 'CAN.G129.22' => 'can', 'CAN.G1334.10' => 'can', 'CAN.G183.22' => 'can', 'CAN.G274.23' => 'can', 'CAN.G449.34' => 'can', 'CAN.G625.79' => 'can', 'CAN.G665.11' => 'can', 'CAN.G865.11' => 'can', 'CAN.G962.9' => 'can', 'CANSAT25G1223' => 'cansat', 'CANSAT25G1513' => 'cansat', 'CANSAT54G1029' => 'cansat', 'CANSAT54G1951' => 'cansat', 'CANSAT56G0564' => 'cansat', 'CANSAT64G0484' => 'cansat', 'CANSAT78G1556' => 'cansat', 'CANSAT78G2123' => 'cansat', 'CANSAT78G2416' => 'cansat', 'CANSAT80G1434' => 'cansat', 'CARHR023380' => 'chi', 'CARHR079560' => 'chi', 'CARHR080640' => 'chi', 'CARHR186210' => 'chi', 'CARHR193900' => 'chi', 'CARHR207870' => 'chi', 'CARHR214880' => 'chi', 'CARHR289750' => 'chi', 'Carub.0001s2250' => 'cru', 'Carub.0002s0803' => 'cru', 'Carub.0003s0447' => 'cru', 'Carub.0003s0556' => 'cru', 'Carub.0006s0429' => 'cru', 'Carub.0006s1741' => 'cru', 'Carub.0006s2489' => 'cru', 'Carub.0007s3305' => 'cru', 'Ca_00641_v3' => 'car', 'Ca_01940_v3' => 'car', 'Ca_05804_v3' => 'car', 'Ca_06010_v3' => 'car', 'Ca_09143_v3' => 'car', 'Ca_09369_v3' => 'car', 'Ca_10099_v3' => 'car', 'Ca_10127_v3' => 'car', 'Ca_10504_v3' => 'car', 'Ca_21595_v3' => 'car', 'Cc00_g13310' => 'ccan', 'Cc02_g05820' => 'ccan', 'Cc02_g33120' => 'ccan', 'Cc03_g02010' => 'ccan', 'Cc03_g03140' => 'ccan', 'Cc11_g08860' => 'ccan', 'CDE01G0254' => 'cde', 'CDE02G4349' => 'cde', 'CDE04G1387' => 'cde', 'CDE05G0773' => 'cde', 'CDE05G3676' => 'cde', 'CDE06G1986' => 'cde', 'CDE11G0193' => 'cde', 'CDE11G0338' => 'cde', 'CDE12G0659' => 'cde', 'Cfa006554' => 'cfa', 'Cfa006623' => 'cfa', 'Cfa007857' => 'cfa', 'Cfa008592' => 'cfa', 'Cfa015585' => 'cfa', 'Ciclev10000747m.g' => 'ccl', 'Ciclev10001480m.g' => 'ccl', 'Ciclev10004709m.g' => 'ccl', 'Ciclev10013773m.g' => 'ccl', 'Ciclev10015481m.g' => 'ccl', 'Ciclev10018208m.g' => 'ccl', 'Ciclev10021017m.g' => 'ccl', 'Ciclev10033238m.g' => 'ccl', 'CiPaw.01G149000' => 'cil', 'CiPaw.01G160300' => 'cil', 'CiPaw.01G303000' => 'cil', 'CiPaw.02G092700' => 'cil', 'CiPaw.04G045600' => 'cil', 'CiPaw.05G248300' => 'cil', 'CiPaw.06G012700' => 'cil', 'CiPaw.07G015400' => 'cil', 'CiPaw.07G020900' => 'cil', 'CiPaw.07G105600' => 'cil', 'CiPaw.08G097700' => 'cil', 'CiPaw.08G162500' => 'cil', 'CiPaw.12G137200' => 'cil', 'ClCG00G005810' => 'cla', 'ClCG01G006110' => 'cla', 'ClCG02G015460' => 'cla', 'ClCG03G016850' => 'cla', 'ClCG03G017100' => 'cla', 'ClCG05G005420' => 'cla', 'ClCG05G006050' => 'cla', 'ClCG05G010850' => 'cla', 'ClCG06G005820' => 'cla', 'ClCG10G004210' => 'cla', 'ClCG10G004240' => 'cla', 'ClCG11G005930' => 'cla', 'COL.COLO4_09124' => 'col', 'COL.COLO4_10512' => 'col', 'COL.COLO4_13411' => 'col', 'COL.COLO4_15701' => 'col', 'COL.COLO4_20462' => 'col', 'COL.COLO4_21650' => 'col', 'COL.COLO4_23389' => 'col', 'COL.COLO4_25813' => 'col', 'Cpa.g.sc116.18' => 'cpa', 'Cpa.g.sc16.22' => 'cpa', 'Cpa.g.sc19.110' => 'cpa', 'Cpa.g.sc211.1' => 'cpa', 'Cpa.g.sc48.23' => 'cpa', 'Cpa.g.sc48.88' => 'cpa', 'Cpa.g.sc70.32' => 'cpa', 'Cpa.g.sc9.203' => 'cpa', 'CsaV3_1G039090' => 'csa', 'CsaV3_2G006610' => 'csa', 'CsaV3_3G004050' => 'csa', 'CsaV3_3G013710' => 'csa', 'CsaV3_3G014590' => 'csa', 'CsaV3_3G017660' => 'csa', 'CsaV3_5G028550' => 'csa', 'CsaV3_5G035570' => 'csa', 'CsaV3_6G002070' => 'csa', 'CsaV3_6G018590' => 'csa', 'CsaV3_6G018600' => 'csa', 'CsaV3_7G016200' => 'csa', 'CSS0002618' => 'camsi', 'CSS0009158' => 'camsi', 'CSS0016617' => 'camsi', 'CSS0016931' => 'camsi', 'CSS0020567' => 'camsi', 'CSS0021736' => 'camsi', 'CSS0022597' => 'camsi', 'CSS0026985' => 'camsi', 'CSS0032030' => 'camsi', 'CSS0034702' => 'camsi', 'CSS0041738' => 'camsi', 'CSS0042599' => 'camsi', 'CSS0043309' => 'camsi', 'CSS0048661' => 'camsi', 'CSS0049482' => 'camsi', 'CSS0050336' => 'camsi', 'DCAR_002413' => 'dca', 'DCAR_003318' => 'dca', 'DCAR_007286' => 'dca', 'DCAR_011690' => 'dca', 'DCAR_012387' => 'dca', 'DCAR_015174' => 'dca', 'DCAR_021816' => 'dca', 'DCAR_024565' => 'dca', 'DCAR_024583' => 'dca', 'DCAR_027154' => 'dca', 'DCAR_029173' => 'dca', 'DCAR_029431' => 'dca', 'DCAR_030213' => 'dca', 'Dinv05157' => 'din', 'Dinv10568' => 'din', 'Dinv12999' => 'din', 'Dinv14870' => 'din', 'Dinv19722' => 'din', 'Dinv28240' => 'din', 'Dinv29767' => 'din', 'Dinv30800' => 'din', 'Dinv33031' => 'din', 'Dinv33258' => 'din', 'Dinv38396' => 'din', 'Dinv40265' => 'din', 'Dinv40323' => 'din', 'Dinv44482' => 'din', 'Duzib106G1944' => 'dzi', 'Duzib106G1970' => 'dzi', 'Duzib128G0684' => 'dzi', 'Duzib128G1162' => 'dzi', 'Duzib133G1196' => 'dzi', 'Duzib138G0686' => 'dzi', 'Duzib151G0073' => 'dzi', 'Duzib177G0455' => 'dzi', 'Duzib177G0908' => 'dzi', 'Duzib212G0287' => 'dzi', 'Duzib248G0732' => 'dzi', 'Duzib251G0101' => 'dzi', 'Duzib268G0327' => 'dzi', 'ECA232G1131' => 'eca', 'ECA233G1921' => 'eca', 'ECA234G3541' => 'eca', 'ECA234G4505' => 'eca', 'ECA236G0141' => 'eca', 'ECA236G4589' => 'eca', 'ECA238G0031' => 'eca', 'ECA240G2947' => 'eca', 'ECA240G3178' => 'eca', 'EL10Ac2g04493' => 'bvu', 'EL10Ac2g04916' => 'bvu', 'EL10Ac3g06363' => 'bvu', 'EL10Ac3g06590' => 'bvu', 'EL10Ac4g09331' => 'bvu', 'EL10Ac4g09925' => 'bvu', 'EL10Ac7g17484' => 'bvu', 'Eucgr.B01142' => 'egr', 'Eucgr.B01919' => 'egr', 'Eucgr.B01997' => 'egr', 'Eucgr.G03105' => 'egr', 'Eucgr.H03576' => 'egr', 'Eucgr.H03579' => 'egr', 'Eucgr.H03592' => 'egr', 'Eucgr.H03594' => 'egr', 'Eucgr.H03595' => 'egr', 'Eucgr.H03597' => 'egr', 'Eucgr.H04474' => 'egr', 'Eucgr.H04515' => 'egr', 'Eucgr.I01563' => 'egr', 'Eucgr.K03459' => 'egr', 'FAN02G0264' => 'fan', 'FAN03G0385' => 'fan', 'FAN05G0808' => 'fan', 'FAN05G1349' => 'fan', 'FAN05G4392' => 'fan', 'FAN05G5273' => 'fan', 'FAN06G1356' => 'fan', 'FAN07G0772' => 'fan', 'FAN07G1117' => 'fan', 'FAN07G1232' => 'fan', 'FAN09G4603' => 'fan', 'FAN10G1782' => 'fan', 'FAN10G2014' => 'fan', 'FAN12G0085' => 'fan', 'FAN12G2402' => 'fan', 'FAN12G3162' => 'fan', 'FAN12G3990' => 'fan', 'FAN14G3702' => 'fan', 'FAN14G5262' => 'fan', 'FAN15G2574' => 'fan', 'FAN16G0037' => 'fan', 'FAN16G3047' => 'fan', 'FAN17G1094' => 'fan', 'FAN17G1289' => 'fan', 'FAN17G1550' => 'fan', 'FAN20G2780' => 'fan', 'FAN22G0660' => 'fan', 'FAN22G1850' => 'fan', 'FAN24G2023' => 'fan', 'FAN27G0616' => 'fan', 'FvH4_2g25240' => 'fve', 'FvH4_3g05420' => 'fve', 'FvH4_4g14520' => 'fve', 'FvH4_4g17940' => 'fve', 'FvH4_4g32260' => 'fve', 'FvH4_6g05480' => 'fve', 'FvH4_6g06500' => 'fve', 'FvH4_7g25401' => 'fve', 'Glyma.02G068700' => 'gma', 'Glyma.02G260700' => 'gma', 'Glyma.03G212400' => 'gma', 'Glyma.03G236200' => 'gma', 'Glyma.03G239800' => 'gma', 'Glyma.07G248100' => 'gma', 'Glyma.07G257300' => 'gma', 'Glyma.09G045200' => 'gma', 'Glyma.10G152100' => 'gma', 'Glyma.10G156100' => 'gma', 'Glyma.10G264000' => 'gma', 'Glyma.11G218850' => 'gma', 'Glyma.11G234100' => 'gma', 'Glyma.13G208400' => 'gma', 'Glyma.15G104400' => 'gma', 'Glyma.15G147400' => 'gma', 'Glyma.16G150100' => 'gma', 'Glyma.17G016800' => 'gma', 'Glyma.17G026000' => 'gma', 'Glyma.18G022900' => 'gma', 'Glyma.19G209500' => 'gma', 'Glyma.19G236700' => 'gma', 'Glyma.20G126300' => 'gma', 'Glyma.20G232200' => 'gma', 'Gohir.A07G164600' => 'ghi', 'Gohir.A08G075200' => 'ghi', 'Gohir.A08G101032' => 'ghi', 'Gohir.A08G208900' => 'ghi', 'Gohir.A08G211600' => 'ghi', 'Gohir.A09G054400' => 'ghi', 'Gohir.A11G263600' => 'ghi', 'Gohir.A11G267400' => 'ghi', 'Gohir.A12G010300' => 'ghi', 'Gohir.A13G013500' => 'ghi', 'Gohir.D07G179833' => 'ghi', 'Gohir.D08G084300' => 'ghi', 'Gohir.D08G225800' => 'ghi', 'Gohir.D08G228300' => 'ghi', 'Gohir.D09G053480' => 'ghi', 'Gohir.D11G273800' => 'ghi', 'Gohir.D11G277400' => 'ghi', 'Gohir.D12G010500' => 'ghi', 'Gohir.D13G014600' => 'ghi', 'Gorai.001G200700' => 'gra', 'Gorai.004G088800' => 'gra', 'Gorai.004G239800' => 'gra', 'Gorai.004G242600' => 'gra', 'Gorai.006G054000' => 'gra', 'Gorai.007G295300' => 'gra', 'Gorai.007G299600' => 'gra', 'Gorai.008G010400' => 'gra', 'Gorai.013G015800' => 'gra', 'GSVIVG01000021001' => 'vvi', 'GSVIVG01011777001' => 'vvi', 'GSVIVG01017753001' => 'vvi', 'GSVIVG01017890001' => 'vvi', 'GSVIVG01027966001' => 'vvi', 'GSVIVG01030880001' => 'vvi', 'GSVIVG01031153001' => 'vvi', 'GSVIVG01032731001' => 'vvi', 'GSVIVG01032941001' => 'vvi', 'HanXRQChr03g0080771' => 'han', 'HanXRQChr04g0118151' => 'han', 'HanXRQChr08g0212661' => 'han', 'HanXRQChr08g0222621' => 'han', 'HanXRQChr09g0262311' => 'han', 'HanXRQChr10g0290041' => 'han', 'HanXRQChr10g0310421' => 'han', 'HanXRQChr10g0317181' => 'han', 'HanXRQChr11g0339531' => 'han', 'HanXRQChr12g0359381' => 'han', 'HanXRQChr12g0377611' => 'han', 'HanXRQChr13g0411351' => 'han', 'HanXRQChr14g0446381' => 'han', 'HanXRQChr15g0493871' => 'han', 'HanXRQChr17g0566971' => 'han', 'Haze_00959' => 'cav', 'Haze_01213' => 'cav', 'Haze_04146' => 'cav', 'Haze_04227' => 'cav', 'Haze_04884' => 'cav', 'Haze_11022' => 'cav', 'Haze_14212' => 'cav', 'Haze_14991' => 'cav', 'Haze_17306' => 'cav', 'Hma1.2p1_0081F.1_g042480' => 'hma', 'Hma1.2p1_0464F.1_g158310' => 'hma', 'Hma1.2p1_0511F.1_g169070' => 'hma', 'Hma1.2p1_0832F.1_g225690' => 'hma', 'Hma1.2p1_1037F.1_g250580' => 'hma', 'Hma1.2p1_1292F.1_g273650' => 'hma', 'Hma1.2p1_1362F.1_g278200' => 'hma', 'Hma1.2p1_1374F.1_g278785' => 'hma', 'Hma1.2p1_2670F.1_g326640' => 'hma', 'HPP92_000182' => 'vpl', 'HPP92_002142' => 'vpl', 'HPP92_003556' => 'vpl', 'HPP92_006926' => 'vpl', 'HPP92_007166' => 'vpl', 'HPP92_010694' => 'vpl', 'HPP92_011529' => 'vpl', 'HPP92_013660' => 'vpl', 'HPP92_013678' => 'vpl', 'HPP92_015237' => 'vpl', 'HPP92_018253' => 'vpl', 'HPP92_018390' => 'vpl', 'HPP92_024417' => 'vpl', 'HPP92_026816' => 'vpl', 'Hund00943' => 'sun', 'Hund07053' => 'sun', 'Hund12193' => 'sun', 'Hund13522' => 'sun', 'Hund18128' => 'sun', 'Hund20560' => 'sun', 'Hund20684' => 'sun', 'Hund21707' => 'sun', 'Lalb_Chr02g0148151' => 'lal', 'Lalb_Chr04g0250351' => 'lal', 'Lalb_Chr04g0259791' => 'lal', 'Lalb_Chr06g0165561' => 'lal', 'Lalb_Chr06g0167791' => 'lal', 'Lalb_Chr07g0177721' => 'lal', 'Lalb_Chr11g0075131' => 'lal', 'Lalb_Chr12g0196211' => 'lal', 'Lalb_Chr12g0196221' => 'lal', 'Lalb_Chr13g0303641' => 'lal', 'Lalb_Chr13g0304121' => 'lal', 'Lalb_Chr15g0078631' => 'lal', 'Lalb_Chr15g0087371' => 'lal', 'Lalb_Chr17g0347011' => 'lal', 'Lalb_Chr18g0056101' => 'lal', 'Lalb_Chr20g0118441' => 'lal', 'Lalb_Chr21g0308471' => 'lal', 'Lalb_Chr21g0310601' => 'lal', 'Lalb_Chr21g0310771' => 'lal', 'Lj1A33G81' => 'lonja', 'Lj1g0010998' => 'lja', 'Lj1g0011037' => 'lja', 'Lj1g0025924' => 'lja', 'Lj1g0026141' => 'lja', 'Lj1P1156T18' => 'lonja', 'Lj3A874T75' => 'lonja', 'Lj3C779T2' => 'lonja', 'Lj3g0008444' => 'lja', 'Lj3P755T39' => 'lonja', 'Lj4g0000467' => 'lja', 'Lj4g0021507' => 'lja', 'Lj5g0006582' => 'lja', 'Lj5g0008903' => 'lja', 'Lj5g0012045' => 'lja', 'Lj6A748T53' => 'lonja', 'Lj6C675T3' => 'lonja', 'Lj6g0005585' => 'lja', 'Lj6g0010443' => 'lja', 'Lj6g0027749' => 'lja', 'Lj9A142G3' => 'lonja', 'Lj9P684T19' => 'lonja', 'LjContig00357g0023458' => 'lja', 'Lsat_1_v5_gn_4_14961' => 'lsa', 'Lsat_1_v5_gn_4_154841' => 'lsa', 'Lsat_1_v5_gn_5_53640' => 'lsa', 'Lsat_1_v5_gn_5_76560' => 'lsa', 'Lsat_1_v5_gn_7_68501' => 'lsa', 'Lsat_1_v5_gn_8_13301' => 'lsa', 'Lsat_1_v5_gn_8_43280' => 'lsa', 'Lsat_1_v5_gn_8_54740' => 'lsa', 'Lsat_1_v5_gn_9_87041' => 'lsa', 'Manes.01G115100' => 'mes', 'Manes.01G216400' => 'mes', 'Manes.03G184400' => 'mes', 'Manes.03G194600' => 'mes', 'Manes.04G096100' => 'mes', 'Manes.05G064600' => 'mes', 'Manes.07G136400' => 'mes', 'Manes.08G118400' => 'mes', 'Manes.08G122800' => 'mes', 'Manes.09G164500' => 'mes', 'Manes.09G169700' => 'mes', 'Manes.15G012800' => 'mes', 'Manes.15G023400' => 'mes', 'Manes.15G126600' => 'mes', 'Manes.17G075400' => 'mes', 'MBI07_g31503_MAGBIO' => 'mbi', 'MBI11_g13134_MAGBIO' => 'mbi', 'MBI11_g45189_MAGBIO' => 'mbi', 'MBI15_g19958_MAGBIO' => 'mbi', 'MBI16_g05919_MAGBIO' => 'mbi', 'MBI16_g46275_MAGBIO' => 'mbi', 'MBI17_g34453_MAGBIO' => 'mbi', 'MBI18_g04688_MAGBIO' => 'mbi', 'MBI19_g02905_MAGBIO' => 'mbi', 'MBI19_g29233_MAGBIO' => 'mbi', 'MD01G1160400' => 'mdo', 'MD03G1184800' => 'mdo', 'MD03G1282300' => 'mdo', 'MD04G1201300' => 'mdo', 'MD04G1208200' => 'mdo', 'MD11G1304000' => 'mdo', 'MD12G1213700' => 'mdo', 'MD12G1222200' => 'mdo', 'MD13G1169200' => 'mdo', 'MD16G1029800' => 'mdo', 'MD16G1184300' => 'mdo', 'Medtr1g082650' => 'mtr', 'Medtr1g083310' => 'mtr', 'Medtr1g107565' => 'mtr', 'Medtr2g018790' => 'mtr', 'Medtr2g022240' => 'mtr', 'Medtr2g022250' => 'mtr', 'Medtr2g436830' => 'mtr', 'Medtr3g067750' => 'mtr', 'Medtr3g072000' => 'mtr', 'Medtr4g065780' => 'mtr', 'Medtr4g117140' => 'mtr', 'Medtr4g117220' => 'mtr', 'Medtr4g119820' => 'mtr', 'Medtr5g083710' => 'mtr', 'Medtr5g097550' => 'mtr', 'Medtr7g108560' => 'mtr', 'Medtr7g113110' => 'mtr', 'Medtr7g113750' => 'mtr', 'MELO3C004225.2' => 'cme', 'MELO3C005316.2' => 'cme', 'MELO3C006564.2' => 'cme', 'MELO3C006660.2' => 'cme', 'MELO3C014100.2' => 'cme', 'MELO3C015311.2' => 'cme', 'MELO3C015336.2' => 'cme', 'MELO3C019982.2' => 'cme', 'MELO3C020302.2' => 'cme', 'MELO3C021404.2' => 'cme', 'Migut.A00133' => 'egut', 'Migut.B01060' => 'egut', 'Migut.D00281' => 'egut', 'Migut.F00616' => 'egut', 'Migut.G00167' => 'egut', 'Migut.G00267' => 'egut', 'Migut.G00268' => 'egut', 'Migut.G00271' => 'egut', 'Migut.H01762' => 'egut', 'Migut.I00104' => 'egut', 'Migut.L00471' => 'egut', 'MSTRG.10015' => 'ama', 'MSTRG.10091' => 'ama', 'MSTRG.13576' => 'ama', 'MSTRG.20422' => 'ama', 'MSTRG.20431' => 'ama', 'MSTRG.21620' => 'ama', 'MSTRG.2183' => 'ama', 'MSTRG.21832' => 'ama', 'MSTRG.21833' => 'ama', 'MSTRG.24755' => 'ama', 'MSTRG.27294' => 'ama', 'MSTRG.3922' => 'ama', 'MSTRG.3996' => 'ama', 'Nitab4.5_0000267g0020' => 'nta', 'Nitab4.5_0000960g0090' => 'nta', 'Nitab4.5_0001044g0120' => 'nta', 'Nitab4.5_0001291g0070' => 'nta', 'Nitab4.5_0001643g0070' => 'nta', 'Nitab4.5_0002031g0100' => 'nta', 'Nitab4.5_0002248g0010' => 'nta', 'Nitab4.5_0002456g0200' => 'nta', 'Nitab4.5_0002702g0020' => 'nta', 'Nitab4.5_0002854g0110' => 'nta', 'Nitab4.5_0004776g0010' => 'nta', 'Nitab4.5_0005076g0030' => 'nta', 'Nitab4.5_0006988g0010' => 'nta', 'Nitab4.5_0007425g0040' => 'nta', 'Nitab4.5_0010962g0010' => 'nta', 'Nitab4.5_0011880g0040' => 'nta', 'Nn1g02168' => 'nnu', 'Nn2g13284' => 'nnu', 'Nn3g18194' => 'nnu', 'Nn3g21431' => 'nnu', 'Nn4g22054' => 'nnu', 'Nn4g24109' => 'nnu', 'Nn4g25875' => 'nnu', 'Nn4g26198' => 'nnu', 'Oeu016650.1' => 'oeu', 'Oeu023740.1' => 'oeu', 'Oeu028920.1' => 'oeu', 'Oeu030336.1' => 'oeu', 'Oeu030984.1' => 'oeu', 'Oeu037683.1' => 'oeu', 'Oeu037750.1' => 'oeu', 'Oeu042424.1' => 'oeu', 'Oeu042784.1' => 'oeu', 'Oeu045880.1' => 'oeu', 'Oeu060380.1' => 'oeu', 'Oeu064610.1' => 'oeu', 'Os01g0125600' => 'osa', 'Os01g0826000' => 'osa', 'Os01g0933200' => 'osa', 'Os03g0345700' => 'osa', 'Os05g0150733' => 'osa', 'Os05g0368600' => 'osa', 'Os07g0671400' => 'osa', 'Os11g0147500' => 'osa', 'Os12g0144600' => 'osa', 'Peaxi162Scf00037g00123' => 'pax', 'Peaxi162Scf00037g01024' => 'pax', 'Peaxi162Scf00104g00332' => 'pax', 'Peaxi162Scf00196g01022' => 'pax', 'Peaxi162Scf00205g00218' => 'pax', 'Peaxi162Scf00253g00161' => 'pax', 'Peaxi162Scf00284g00228' => 'pax', 'Peaxi162Scf00498g00727' => 'pax', 'Peaxi162Scf00684g00115' => 'pax', 'Peaxi162Scf00689g00524' => 'pax', 'Peaxi162Scf00803g00051' => 'pax', 'PGR004G1850' => 'pgr', 'PGR006G0001' => 'pgr', 'PGR031G0260' => 'pgr', 'PGR031G0428' => 'pgr', 'PGR031G3900' => 'pgr', 'PGR042G0924' => 'pgr', 'PGR044G0037' => 'pgr', 'PGR083G0269' => 'pgr', 'PGR083G0529' => 'pgr', 'PGR083G1402' => 'pgr', 'PGR083G1537' => 'pgr', 'PGR102G0828' => 'pgr', 'PGR142G0307' => 'pgr', 'PGR142G2231' => 'pgr', 'PGSC0003DMG400011344' => 'stu', 'PGSC0003DMG400023960' => 'stu', 'PGSC0003DMG400024753' => 'stu', 'PGSC0003DMG400028581' => 'stu', 'PGSC0003DMG400030552' => 'stu', 'PGSC0003DMG400030602' => 'stu', 'PGSC0003DMG400033112' => 'stu', 'Phvul.001G205300' => 'pvu', 'Phvul.001G247400' => 'pvu', 'Phvul.003G092500' => 'pvu', 'Phvul.003G104900' => 'pvu', 'Phvul.006G090100' => 'pvu', 'Phvul.006G093700' => 'pvu', 'Phvul.006G153400' => 'pvu', 'Phvul.007G038000' => 'pvu', 'Phvul.007G181500' => 'pvu', 'Phvul.007G196900' => 'pvu', 'Phvul.008G219600' => 'pvu', 'Phvul.009G247600' => 'pvu', 'Potri.002G206900' => 'ptr', 'Potri.004G091700' => 'ptr', 'Potri.005G026100' => 'ptr', 'Potri.005G036300' => 'ptr', 'Potri.008G128400' => 'ptr', 'Potri.008G202800' => 'ptr', 'Potri.010G024700' => 'ptr', 'Potri.010G114300' => 'ptr', 'Potri.010G175800' => 'ptr', 'Potri.010G182700' => 'ptr', 'Potri.013G017700' => 'ptr', 'Potri.013G025300' => 'ptr', 'Potri.014G132000' => 'ptr', 'Potri.014G140600' => 'ptr', 'Pp3c11_7800' => 'ppa', 'Pp3c12_25640' => 'ppa', 'Pp3c16_17910' => 'ppa', 'Prupe.1G137600' => 'ppe', 'Prupe.1G151700' => 'ppe', 'Prupe.1G323100' => 'ppe', 'Prupe.2G258300' => 'ppe', 'Prupe.3G152200' => 'ppe', 'Prupe.4G241700' => 'ppe', 'Prupe.6G321400' => 'ppe', 'Prupe.6G329100' => 'ppe', 'Prupe.8G257200' => 'ppe', 'Psat0s1241g0040' => 'psa', 'Psat0s1377g0160' => 'psa', 'Psat1g153560' => 'psa', 'Psat1g183400' => 'psa', 'Psat2g029200' => 'psa', 'Psat3g011160' => 'psa', 'Psat4g025800' => 'psa', 'Psat4g031280' => 'psa', 'Psat5g122640' => 'psa', 'Psat5g125920' => 'psa', 'Psat6g150440' => 'psa', 'Psat6g220320' => 'psa', 'Psat7g134920' => 'psa', 'PSO017G5822' => 'pso', 'PSO170G1749' => 'pso', 'PSO210G3772' => 'pso', 'PSO210G4601' => 'pso', 'PSO210G6472' => 'pso', 'PSO339G3969' => 'pso', 'PSO384G1077' => 'pso', 'PSO407G0131' => 'pso', 'PSO478G1494' => 'pso', 'PSO832G0244' => 'pso', 'PSO832G1420' => 'pso', 'PSO832G3103' => 'pso', 'QL01p002036' => 'qlo', 'QL02p048165' => 'qlo', 'QL02p068120' => 'qlo', 'QL03p004617' => 'qlo', 'QL03p021323' => 'qlo', 'QL03p021357' => 'qlo', 'QL06p004190' => 'qlo', 'QL06p008798' => 'qlo', 'QL08p064089' => 'qlo', 'QL08p064120' => 'qlo', 'QL12p026987' => 'qlo', 'RcHm_v2.0_Chr1g0371361' => 'rch', 'RcHm_v2.0_Chr3g0454261' => 'rch', 'RcHm_v2.0_Chr3g0455651' => 'rch', 'RcHm_v2.0_Chr4g0418311' => 'rch', 'RcHm_v2.0_Chr4g0422111' => 'rch', 'RcHm_v2.0_Chr4g0441051' => 'rch', 'RcHm_v2.0_Chr5g0053851' => 'rch', 'RcHm_v2.0_Chr6g0293381' => 'rch', 'Rhsim01G0283400' => 'rsi', 'Rhsim04G0206800' => 'rsi', 'Rhsim04G0221200' => 'rsi', 'Rhsim05G0141100' => 'rsi', 'Rhsim07G0180900' => 'rsi', 'Rhsim08G0037200' => 'rsi', 'Rhsim09G0067300' => 'rsi', 'Rhsim13G0022900' => 'rsi', 'Rhsim13G0023000' => 'rsi', 'Sabra02G0152800' => 'sbr', 'Sabra04G0061800' => 'sbr', 'Sabra05G0031500' => 'sbr', 'Sabra05G0036800' => 'sbr', 'Sabra08G0096900' => 'sbr', 'Sabra08G0158700' => 'sbr', 'Sabra10G0014300' => 'sbr', 'Sabra10G0084300' => 'sbr', 'Sabra13G0016700' => 'sbr', 'Sabra13G0020700' => 'sbr', 'Sabra13G0026500' => 'sbr', 'Sabra14G0098100' => 'sbr', 'Sabra14G0106000' => 'sbr', 'SalBow2G0691' => 'sbo', 'SalBow3G1779' => 'sbo', 'SalBow3G2984' => 'sbo', 'SalBow5G3417' => 'sbo', 'SalBow5G3772' => 'sbo', 'SalBow7G2560' => 'sbo', 'SalBow7G4582' => 'sbo', 'SalBow8G1681' => 'sbo', 'SalBow8G2105' => 'sbo', 'Sc04g0005670' => 'sci', 'Sc09g0002980' => 'sci', 'Sc09g0003280' => 'sci', 'Sc10g0000880' => 'sci', 'Sc13g0003490' => 'sci', 'Sc13g0004010' => 'sci', 'Sc14g0005550' => 'sci', 'Sc16g0008420' => 'sci', 'Sc16g0008600' => 'sci', 'Sc19g0004510' => 'sci', 'Sed0000053' => 'sed', 'Sed0000495' => 'sed', 'Sed0002633' => 'sed', 'Sed0003129' => 'sed', 'Sed0005450' => 'sed', 'Sed0008603' => 'sed', 'Sed0010325' => 'sed', 'Sed0014724' => 'sed', 'Sed0022713' => 'sed', 'Sed0025184' => 'sed', 'Sed0026591' => 'sed', 'Sed0026772' => 'sed', 'Sed0027534' => 'sed', 'Sed0027677' => 'sed', 'SEGI_07017' => 'sgi', 'SEGI_17029' => 'sgi', 'SGA_v2.0_scaffold106G30570' => 'sas', 'SGA_v2.0_scaffold135G34958' => 'sas', 'SGA_v2.0_scaffold166G38370' => 'sas', 'SGA_v2.0_scaffold1G00382' => 'sas', 'SGA_v2.0_scaffold237G43821' => 'sas', 'SGA_v2.0_scaffold373G50168' => 'sas', 'SGA_v2.0_scaffold39G15159' => 'sas', 'SGA_v2.0_scaffold39G15363' => 'sas', 'SGA_v2.0_scaffold67G22639' => 'sas', 'SGA_v2.0_scaffold9G04973' => 'sas', 'SMO118G0153' => 'smo', 'Solyc01g066880.3' => 'sly', 'Solyc01g080070.4' => 'sly', 'Solyc01g098760.4' => 'sly', 'Solyc01g099600.4' => 'sly', 'Solyc02g091310.2' => 'sly', 'Solyc05g008300.3' => 'sly', 'Solyc06g008950.2' => 'sly', 'Solyc06g050710.4' => 'sly', 'Solyc09g064730.3' => 'sly', 'Sopen01g028480' => 'spe', 'Sopen01g031850' => 'spe', 'Sopen01g042290' => 'spe', 'Sopen01g043130' => 'spe', 'Sopen02g035930' => 'spe', 'Sopen05g004130' => 'spe', 'Sopen06g016270' => 'spe', 'Sopen09g026390' => 'spe', 'Sp1g20460' => 'spa', 'Sp2g06720' => 'spa', 'Sp2g20850' => 'spa', 'Sp3g04070' => 'spa', 'Sp3g05080' => 'spa', 'Sp6g25290' => 'spa', 'Sp6g37460' => 'spa', 'Sp7g04160' => 'spa', 'TAR362G0969' => 'tar', 'TAR362G1070' => 'tar', 'TAR365G1251' => 'tar', 'TAR371G0511' => 'tar', 'TAR622G0348' => 'tar', 'TAR629G0837' => 'tar', 'TAR633G1595' => 'tar', 'TAR636G3055' => 'tar', 'TAR636G3323' => 'tar', 'THA.LOC104802746' => 'tha', 'THA.LOC104803110' => 'tha', 'THA.LOC104805601' => 'tha', 'THA.LOC104805888' => 'tha', 'THA.LOC104809199' => 'tha', 'THA.LOC104817506' => 'tha', 'THA.LOC104818680' => 'tha', 'THA.LOC104820796' => 'tha', 'THA.LOC104821721' => 'tha', 'THA.LOC104821878' => 'tha', 'THA.LOC104822309' => 'tha', 'THA.LOC104826837' => 'tha', 'Thecc.01G296000' => 'tca', 'Thecc.02G279600' => 'tca', 'Thecc.04G052800' => 'tca', 'Thecc.04G122400' => 'tca', 'Thecc.04G222100' => 'tca', 'Thecc.05G306700' => 'tca', 'Thecc.05G312300' => 'tca', 'Thecc.10G008500' => 'tca', 'Thhalv10004455m.g' => 'esa', 'Thhalv10009651m.g' => 'esa', 'Thhalv10013101m.g' => 'esa', 'Thhalv10015175m.g' => 'esa', 'Thhalv10020397m.g' => 'esa', 'Thhalv10020810m.g' => 'esa', 'Thhalv10023508m.g' => 'esa', 'Thhalv10028162m.g' => 'esa', 'TPR.G13851' => 'tpr', 'TPR.G13856' => 'tpr', 'TPR.G15841' => 'tpr', 'TPR.G20123' => 'tpr', 'TPR.G20212' => 'tpr', 'TPR.G22796' => 'tpr', 'TPR.G27667' => 'tpr', 'TPR.G31404' => 'tpr', 'TPR.G3180' => 'tpr', 'TPR.G33219' => 'tpr', 'TPR.G35647' => 'tpr', 'TPR.G39802' => 'tpr', 'TPR.G6031' => 'tpr', 'TPR.G9635' => 'tpr', 'TWI09G0069' => 'twi', 'TWI12G0073' => 'twi', 'TWI12G0219' => 'twi', 'TWI14G0439' => 'twi', 'TWI23G0379' => 'twi', 'TWI31G0048' => 'twi', 'TWI53G1245' => 'twi', 'TWI56G1360' => 'twi', 'TWI59G1036' => 'twi', 'TWI73G0943' => 'twi', 'unitig_32.g10645' => 'ugi', 'unitig_32.g10800' => 'ugi', 'unitig_32.g10801' => 'ugi', 'unitig_32.g11740' => 'ugi', 'unitig_32.g11741' => 'ugi', 'unitig_52.g17124' => 'ugi', 'unitig_62.g23731' => 'ugi', 'unitig_748.g8346' => 'ugi', 'unitig_748.g8561' => 'ugi', 'unitig_749.g14062' => 'ugi', 'unitig_749.g14063' => 'ugi', 'unitig_8.g3709' => 'ugi', 'vmacro00420' => 'vma', 'vmacro05029' => 'vma', 'vmacro08145' => 'vma', 'vmacro08281' => 'vma', 'vmacro14992' => 'vma', 'vmacro15303' => 'vma', 'vmacro19619' => 'vma', 'vmacro22973' => 'vma', 'VMungo0464G1697' => 'vmu', 'VMungo0540G0465' => 'vmu', 'VMungo0540G1058' => 'vmu', 'VMungo0540G1224' => 'vmu', 'VMungo0720G0233' => 'vmu', 'VMungo0720G1715' => 'vmu', 'VMungo0720G2306' => 'vmu', 'VMungo1215G0488' => 'vmu', 'VMungo1215G1385' => 'vmu', 'VMungo1309G2144' => 'vmu', 'VMungo1383G1757' => 'vmu', 'Zm00001eb016620' => 'zma', 'Zm00001eb092880' => 'zma', 'Zm00001eb111160' => 'zma', 'Zm00001eb125730' => 'zma', 'Zm00001eb142250' => 'zma', 'Zm00001eb204480' => 'zma', 'Zm00001eb238540' => 'zma', 'Zm00001eb267770' => 'zma', 'Zm00001eb330340' => 'zma', 'Zm00001eb334940' => 'zma', 'Zm00001eb368660' => 'zma', 'Zm00001eb394840' => 'zma', 'Zm00001eb406350' => 'zma' ) $gf_id = 'HOM05D000520' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000520' ) $data_identifier = 'HOM05D000520' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 23, 'aar' => (int) 7, 'ach' => (int) 22, 'amhyb' => (int) 8, 'aly' => (int) 8, 'aox' => (int) 7, 'arhy' => (int) 28, 'ath' => (int) 8, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 10, 'bca' => (int) 21, 'bol' => (int) 11, 'bra' => (int) 13, 'can' => (int) 11, 'cansat' => (int) 10, 'chi' => (int) 8, 'cru' => (int) 8, 'car' => (int) 10, 'ccan' => (int) 6, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 8, 'cil' => (int) 13, 'cla' => (int) 12, 'col' => (int) 8, 'cpa' => (int) 8, 'csa' => (int) 12, 'camsi' => (int) 16, 'dca' => (int) 13, 'din' => (int) 14, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 7, 'egr' => (int) 14, 'fan' => (int) 30, 'fve' => (int) 8, 'gma' => (int) 24, 'ghi' => (int) 19, 'gra' => (int) 9, 'vvi' => (int) 9, 'han' => (int) 15, 'cav' => (int) 9, 'hma' => (int) 9, 'vpl' => (int) 14, 'sun' => (int) 8, 'lal' => (int) 19, 'lonja' => (int) 9, 'lja' => (int) 14, 'lsa' => (int) 9, 'mes' => (int) 15, 'mbi' => (int) 10, 'mdo' => (int) 11, 'mtr' => (int) 18, 'cme' => (int) 10, 'egut' => (int) 11, 'ama' => (int) 13, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 14, 'stu' => (int) 7, 'pvu' => (int) 12, 'ptr' => (int) 14, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 13, 'pso' => (int) 12, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 13, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 14, 'sgi' => (int) 2, 'sas' => (int) 10, 'smo' => (int) 1, 'sly' => (int) 9, 'spe' => (int) 8, 'spa' => (int) 8, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 8, 'esa' => (int) 8, 'tpr' => (int) 14, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 8, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb406350' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1